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Plot individual components of wisp fit for a single species level

plot-decomposition.Rd

Extension of plot.ratecount which plots the individual pieces of the rate-count plot for a single species separately. Returns individual plots for data points only, fit lines only, and data points plus fit lines for individual random levels.

Usage

plot.decomposition(
 wisp.results, 
 species, 
 log = FALSE, 
 dim.boundaries = c(), 
 y.lim = NULL
)

Arguments

wisp.results

List, output of the wisp function.

species

Character string, the species level to plot. Must be provided, and only one at a time.

log.scale

Logical, if TRUE, plots on a log scale. Defaults to FALSE.

dim.boundaries

Numeric vector, independent block boundaries to plot for comparison. If empty, the argument is ignored.

y.lim

Numeric vector of length 2, limits for the y-axis of the plots. If NA, defaults to automatic limits.

Value

List of ggplot objects containing the decomposed rate-count plots.